Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888320.1_cds_XP_016442881.1_38099
CDS Infomation

[gene=LOC107768283] [db_xref=GeneID:107768283] [protein=WD repeat-containing protein 3-like] [protein_id=XP_016442881.1] [location=join(725..961,2408..2623,2728..3840,4368..4490,5597..5778,5867..6098,6182..6391,6803..6931,8156..8224,8648..8770,9018..9068,9150..9317)] [gbkey=CDS]
Sequence

ATGGTGAAGGCGTATCTCCGGTATGAGCCGGCGTCGTCGTTTGGGGTAATAGTATCGGGG
GAGTCAAACATCGCCTACGACAGCTCCGGCAAACACTTGTTAACGGCGGCGTTAGAGAAA
GTCGGCGTATGGCATGTGAGGCAGGGTGTTTGCACCAAAAACCTAGCTCCTCCTTCGTCT
AACTCGAAAGGCCTCTCCGTTGCCGTTACTTCAATTGCTTCCTCTTCTTCATCCCTTATA
GCAAGTGGTTATGCTGATGGAAGCATTAGAATCTGGGATTTGGAGAAAGGGATATGTGAA
ACCACACTGAATGGGCATAAAGGGGCTGTCACTGCCCTTCGATTCAATAAGCTTGGATCA
TTGCTTGCATCAGGAAGCAAAGATAATGACATTATTTTATGGGATGTGGTGGGTGAGTCT
GGTCTGTTTCGCCTTCGGGGACATCGCGATCAGGTTACTGATCTTGTTTTCTTGGATTCT
GGCAAAAAGCTGGTAACAGCTTCTAAGGACAAATTTTTGAGGGTATGGGATCTTGATACT
CAACATTGCATGCAGATTATAAGTGGCCATCATACTGAAATTTGGTCCATAGATATTGAC
CCTGAGGAAAGATATCTTGTCACTGGTTCGGCTGACCTTGAGCTTCGTTTTTACACTATA
AAGCATGATTCAGCTGATGGACAATTGATTGCAAACAAAAGTGAAACTGATGTAAATAAG
GACTTGCCTACTGAAAACAAATGGGAAGTATTAAAGCCATTCGGTGAAATTCAACGTCAA
AGCAAAGATAGAGTTGGAACAGTGAGATTTAATAAGTCCGGAAACCTGCTGGCTTGTCAA
GTTGCAGGGAAGACGGTGGAAATATTCCGTGTGCTGGATGAGTCTGAATCTAAACGCAAA
GCAAAAAGAAGAATCAGTAGAAAGAAGGAGAAAAAAGCTGCCAAAGAAGGCCTTGAGGCA
ACGGAAAAAGGAGAGACAGATATTGGAGCTGAAGAAGGCAGCAATCCTGTTGTTACAGTC
ATGGATATCTTCAAGCTTCTTCAGACTCTACGGGCTGGAAAGAAGATCTCCTCAATTTCT
TTCTCCCCAGTCACTTCAAAGAACTCACTGGCTACATTAGCACTGTCTTTGAACAATAAT
TTGTTGGAATTTCATGCTATAGAAAGCAGTTCAACTACTAAATTGAGTGCTATTGAGCTT
CAGGGGCATCGCTCTGATATCAGAAGTGTTACTCTCAGCTCAGATAACACTCTTTTGATG
ACAACTAGTCACAGTGCAATTAAAATATGGAACCCTACTACTGGTTCTTGCCTCCGCACT
ATTGATTCAGGATATGGTCTTTGTGGACTGTTTGTTCCAGGTAACAAGTATGTGGTCGTC
GGTACAAAAGGTGGTACTCTGGAATTTATTGACGTTAGAAGCGGTACTTGTGTGGATGTA
GTGGAAGCCCATGGCGGTTCTGTTCAGTCGATTGCTTTAACTCCAGATGGTACAGGTTTT
CTTACTGGCAGTGCCGATCATGACATTAAATTCTGGGAATTCCAAATGGTACAAAAGGCT
GGTGAAGGGTCTAAGCATTTAACCGCATCTGCTACAAGGAGCTTAAAAATGAATGAAGAT
GTTCTAGTCGTTGCTGTGAGCCCTGATGGTAAATATATTGCTGTTGCCTTGTTGGATAGC
ACAGTAAAGGTCTTCTATATGGATTCACTCAAGTTCTTTCTTTCACTCTACGGTCATAAG
CTGCCTGTATTGTGTATGGATATTTCTTCAGATGGGGATCTGCTTGTCAGTGGCTCTGGA
GACAAAAATGTGAAGATTTGGGGTCTAGATTTTGGAGATTGCCATAAGTCACTTTTTGCG
CATGCTGATAGCGTTATGGGAGTTAAGTTTGTGCGCAACACCCATTACTTTTTCACTGCG
GGGAAAGATCGTCTGGTGAAATACTGGGATGCTGACAAGTTTGAGTTGCTTTTAACCCTC
GAAGGTCACCATGCTGAAGTCTGGTGTCTTGCTGTTAGCAACCGTGGTGATTTTATTGTT
ACAGGATCTCATGATCGGTCCATACGCCGATGGGATCGTACTGAAGAACCATTTTTTCTT
GAGGAAGAGAAAGAAAAGAGACTGGAAGAGATGTTTGAATCAGACATTGACAATGCATTT
GAGAATAAGTATGGACCAAAGGAAGAACTTCCCGAGGAGGGAGCTGTGGCATTAGCGGGG
AAAAAGACTCAAGAGACTCTTACTGCTACAGATTCTATCATTGATGCACTTGACATGGCC
GAAGCGGAACTGAAACGAATTGCTGAACATGAGGAGGACAAATCAAAGGGCAGAGTTTCA
GAATTCAGGCCCAATGTTCTCATGCTTGGTCTTTCTCCTTCTGATTATGTTCTTCGTGCA
TTATCGAGTGTTCATACTAATGATCTGGAGCAAACATTGCTGGCTTTACCCTTTTCTGAT
GCTTTGAAGCTCTTGTCGAACCTGAAGGATTGGGCATGTATCCCAGATAAGGTGGAACTT
GTTTGTAGGATAGCGACAGTGCTATTGCAACTTCATCATCACCAGCTGCTTTCAACTGTC
TCTTCCAGACCCCTCTTGACCGTTCTAAAAGAAACTCTTCATGCAAGAGTTAAGGAATGC
AAAGATGCCCTCGGTTTCAACCTTGCTGCAATGAATCATCTCAAGCAATTGATGTCTATG
AGTTCGGATGCTCTATTTCGTGATGCAAAGGCTAAGTTATTGGAGATACGTGCACGCAAC
ACAAAACGTATTGAAGCAAGGGCAGACACAAAACAAGAAAAGAAGAGAAAGAAGAAACAG
AAGAAGTTGGATGGAGGACATGTTTGGTCATGA

Peptide Sequence

PEP ID

XP_016442881.1
PEP Infomation

PREDICTED: WD repeat-containing protein 3-like [Nicotiana tabacum]
Sequence

MVKAYLRYEPASSFGVIVSGESNIAYDSSGKHLLTAALEKVGVWHVRQGVCTKNLAPPSS
NSKGLSVAVTSIASSSSSLIASGYADGSIRIWDLEKGICETTLNGHKGAVTALRFNKLGS
LLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDSGKKLVTASKDKFLRVWDLDT
QHCMQIISGHHTEIWSIDIDPEERYLVTGSADLELRFYTIKHDSADGQLIANKSETDVNK
DLPTENKWEVLKPFGEIQRQSKDRVGTVRFNKSGNLLACQVAGKTVEIFRVLDESESKRK
AKRRISRKKEKKAAKEGLEATEKGETDIGAEEGSNPVVTVMDIFKLLQTLRAGKKISSIS
FSPVTSKNSLATLALSLNNNLLEFHAIESSSTTKLSAIELQGHRSDIRSVTLSSDNTLLM
TTSHSAIKIWNPTTGSCLRTIDSGYGLCGLFVPGNKYVVVGTKGGTLEFIDVRSGTCVDV
VEAHGGSVQSIALTPDGTGFLTGSADHDIKFWEFQMVQKAGEGSKHLTASATRSLKMNED
VLVVAVSPDGKYIAVALLDSTVKVFYMDSLKFFLSLYGHKLPVLCMDISSDGDLLVSGSG
DKNVKIWGLDFGDCHKSLFAHADSVMGVKFVRNTHYFFTAGKDRLVKYWDADKFELLLTL
EGHHAEVWCLAVSNRGDFIVTGSHDRSIRRWDRTEEPFFLEEEKEKRLEEMFESDIDNAF
ENKYGPKEELPEEGAVALAGKKTQETLTATDSIIDALDMAEAELKRIAEHEEDKSKGRVS
EFRPNVLMLGLSPSDYVLRALSSVHTNDLEQTLLALPFSDALKLLSNLKDWACIPDKVEL
VCRIATVLLQLHHHQLLSTVSSRPLLTVLKETLHARVKECKDALGFNLAAMNHLKQLMSM
SSDALFRDAKAKLLEIRARNTKRIEARADTKQEKKRKKKQKKLDGGHVWS

Transcript Sequence

Gene sequence data has not been registered.